{"product_id":"plant-bioinformatics-david-edwards-9781071620663","title":"Plant Bioinformatics: Methods and Protocols","description":"\u003cp\u003e\u003cb\u003e1. Using GenBank and SRA\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e Eric W. Sayers, Chris O'Sullivan, and Ilene Karsch-Mizrachi\u003c\/p\u003e \u003cp\u003e \u003c\/p\u003e \u003cp\u003e\u003cb\u003e2. Scripting Analyses of Genomes in Ensembl Plants\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e Bruno Contreras-Moreira, Guy Naamati, Marc Rosello, James E. Allen, Sarah E. Hunt, Matthieu Muffato, Astrid Gall, and Paul Flicek\u003c\/p\u003e \u003cp\u003e \u003c\/p\u003e \u003cp\u003e\u003cb\u003e3. CyVerse for Reproducible Research: RNA-Seq Analysis\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e Jason Williams\u003c\/p\u003e \u003cp\u003e \u003c\/p\u003e \u003cp\u003e\u003cb\u003e4. Doing Genetic and Genomic Biology Using the Legume Information System and Associated Resources\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e Sven Redsun, Sam Hokin, Connor T. Cameron, Alan M. Cleary, Joel Berendzen, Sudhansu Dash, Anne V. Brown, Andrew Wilkey, Jacqueline D. Campbell, Wei Huang, Scott R. Kalberer, Nathan T. Weeks, Steven B. Cannon, and Andrew D. Farmer\u003c\/p\u003e \u003cp\u003e\u003c\/p\u003e \u003cp\u003e\u003cb\u003e5. Gramene: A Resource for Comparative Analysis of Plants Genomes and Pathways\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e Marcela Karey Tello-Ruiz, Pankaj Jaiswal, and Doreen Ware\u003c\/p\u003e \u003cp\u003e \u003c\/p\u003e \u003cp\u003e\u003cb\u003e6. CerealsDB: A Whistle-Stop Tour of an Open Access SNP Resource\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e Mark Winfield, Paul Wilkinson, Amanda Burridge, Alexandra Allen, Jane Coghill, Christy Waterfall, Keith Edwards, and Gary Barker\u003c\/p\u003e \u003cp\u003e \u003c\/p\u003e \u003cp\u003e\u003cb\u003e7. The Barley and Wheat Pan-Genomes\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e Nadia Kamal, Thomas Lux, Murukarthick Jayakodi, Georg Haberer, Heidrun Gundlach, Klaus F.X. Mayer, Martin Mascher, and Manuel Spannagl\u003c\/p\u003e \u003cp\u003e \u003c\/p\u003e \u003cp\u003e\u003cb\u003e8. Basics of Bash\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e Robyn Anderson\u003c\/p\u003e \u003cp\u003e \u003c\/p\u003e \u003cp\u003e\u003cb\u003e9. Pipeline Automation via Snakemake\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e Jakob Petereit\u003c\/p\u003e \u003cp\u003e \u003c\/p\u003e \u003cp\u003e\u003cb\u003e10. SciApps: An Automated Platform for Processing and Distribution of Plant Genomics Data\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e Liya Wang, Zhenyuan Lu, Peter Van Buren, and Doreen Ware\u003c\/p\u003e \u003cp\u003e \u003c\/p\u003e \u003cp\u003e\u003cb\u003e11. Trimming and Validation of Illumina Short Reads Using Trimmomatic, Trinity Assembly, and Assessment of RNA-Seq Data\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e Steven O. Sewe, Gon軋lo Silva, Paulo Sicat, Susan E. Seal, and Paul Visendi\u003c\/p\u003e \u003cp\u003e \u003c\/p\u003e \u003cp\u003e\u003cb\u003e12. De Novo Assembly of Linked Reads Using Supernova 2.0\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e Paul Visendi\u003c\/p\u003e \u003cp\u003e \u003c\/p\u003e \u003cp\u003e\u003cb\u003e13. Applications of Optical Mapping for Plant Genome Assembly and Structural Variation Detection\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e Yuxuan Yuan\u003c\/p\u003e \u003cp\u003e \u003c\/p\u003e \u003cp\u003e\u003cb\u003e14. Making a Pangenome Using the Iterative Mapping Approach\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e Cassandria Tay Fernandez\u003c\/p\u003e \u003cp\u003e \u003c\/p\u003e \u003cp\u003e\u003cb\u003e15. Construction of Practical Haplotype Graph (PHG) with the Whole Genome Sequence Data\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e Pradeep Ruperao, Prasad Gandham, and Abhishek Rathore\u003c\/p\u003e \u003cp\u003e \u003c\/p\u003e \u003cp\u003e\u003cb\u003e16. Visualization Tools for Genomic Conservation\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e Venkat Bandi, Carl Gutwin, Jorge N橾ez Siri, Eric Neufeld, Andrew Sharpe, and Isobel Parkin\u003c\/p\u003e \u003cp\u003e\u003c\/p\u003e \u003cp\u003e\u003cb\u003e17. Annotation of Protein-Coding Genes in Plant Genomes\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e Bhavna Hurgobin\u003c\/p\u003e \u003cp\u003e \u003c\/p\u003e\u003cbr\u003e\u003cbr\u003e\u003cb\u003eAuthor:\u003c\/b\u003e David Edwards\u003cbr\u003e\u003cb\u003eISBN-10:\u003c\/b\u003e 1071620665\u003cbr\u003e\u003cb\u003eISBN-13:\u003c\/b\u003e 9781071620663\u003cbr\u003e\u003cb\u003ePublisher:\u003c\/b\u003e Humana\u003cbr\u003e\u003cb\u003eLanguage:\u003c\/b\u003e English\u003cbr\u003e\u003cb\u003ePublished:\u003c\/b\u003e 01\/17\/2022\u003cbr\u003e\u003cb\u003ePages:\u003c\/b\u003e 544\u003cbr\u003e\u003cb\u003eFormat:\u003c\/b\u003e Hardcover\u003cbr\u003e\u003cb\u003eWeight:\u003c\/b\u003e 2.50lbs\u003cbr\u003e\u003cb\u003eSize:\u003c\/b\u003e 10.34h x 7.20w x 1.20d","brand":"David Edwards","offers":[{"title":"Hardcover","offer_id":44128369901823,"sku":"9781071620663","price":179.99,"currency_code":"USD","in_stock":true}],"thumbnail_url":"\/\/cdn.shopify.com\/s\/files\/1\/0662\/2982\/9887\/files\/img_803cfab6-d22c-4633-b442-42fa4b2ead8f.jpg?v=1687458356","url":"https:\/\/www.whiterainbookhouse.com\/products\/plant-bioinformatics-david-edwards-9781071620663","provider":"WR Book House","version":"1.0","type":"link"}